Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Q9CR55 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Q9CR55 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Q9CR55 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.18■□□□□ 0.82
Q9CR55 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CR55 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CR55 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CR55 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.17■□□□□ 0.82
Q9CR55 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CR55 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Q9CR55 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q9CR55 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Q9CR55 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.15■□□□□ 0.82
Q9CR55 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.15■□□□□ 0.82
Q9CR55 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9CR55 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Q9CR55 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Q9CR55 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Q9CR55 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q9CR55 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q9CR55 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q9CR55 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Q9CR55 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 Gm24970-201ENSMUST00000175582 82 ntBASIC20.13■□□□□ 0.81
Q9CR55 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Q9CR55 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Q9CR55 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Q9CR55 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9CR55 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9CR55 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q9CR55 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.11■□□□□ 0.81
Q9CR55 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q9CR55 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q9CR55 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Q9CR55 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9CR55 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Q9CR55 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9CR55 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9CR55 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9CR55 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Q9CR55 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Q9CR55 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.09■□□□□ 0.81
Q9CR55 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q9CR55 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Q9CR55 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.09■□□□□ 0.81
Q9CR55 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Q9CR55 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q9CR55 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q9CR55 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q9CR55 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q9CR55 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q9CR55 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Q9CR55 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Q9CR55 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9CR55 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q9CR55 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Q9CR55 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Q9CR55 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q9CR55 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q9CR55 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q9CR55 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q9CR55 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9CR55 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9CR55 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9CR55 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9CR55 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Q9CR55 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9CR55 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.04■□□□□ 0.8
Q9CR55 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9CR55 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9CR55 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9CR55 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q9CR55 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms