Protein–RNA interactions for Protein: Q99KN9

Clint1, Clathrin interactor 1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clint1Q99KN9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clint1Q99KN9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clint1Q99KN9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clint1Q99KN9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clint1Q99KN9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clint1Q99KN9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clint1Q99KN9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.77■□□□□ 0.76
Clint1Q99KN9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clint1Q99KN9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clint1Q99KN9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Clint1Q99KN9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.76■□□□□ 0.75
Clint1Q99KN9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clint1Q99KN9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Clint1Q99KN9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.75■□□□□ 0.75
Clint1Q99KN9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.75■□□□□ 0.75
Clint1Q99KN9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.75■□□□□ 0.75
Clint1Q99KN9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clint1Q99KN9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clint1Q99KN9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clint1Q99KN9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clint1Q99KN9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clint1Q99KN9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.71■□□□□ 0.75
Clint1Q99KN9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clint1Q99KN9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.7■□□□□ 0.74
Clint1Q99KN9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clint1Q99KN9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clint1Q99KN9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.7■□□□□ 0.74
Clint1Q99KN9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clint1Q99KN9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clint1Q99KN9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clint1Q99KN9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.67■□□□□ 0.74
Clint1Q99KN9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clint1Q99KN9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clint1Q99KN9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clint1Q99KN9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clint1Q99KN9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clint1Q99KN9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clint1Q99KN9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clint1Q99KN9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Clint1Q99KN9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms