Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1Q91V04 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1Q91V04 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.81■□□□□ 0.6
Tram1Q91V04 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.81■□□□□ 0.6
Tram1Q91V04 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tram1Q91V04 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1Q91V04 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tram1Q91V04 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tram1Q91V04 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1Q91V04 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tram1Q91V04 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.79■□□□□ 0.6
Tram1Q91V04 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1Q91V04 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1Q91V04 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1Q91V04 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.78■□□□□ 0.6
Tram1Q91V04 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1Q91V04 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tram1Q91V04 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Tram1Q91V04 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tram1Q91V04 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1Q91V04 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tram1Q91V04 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.75■□□□□ 0.59
Tram1Q91V04 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tram1Q91V04 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.75■□□□□ 0.59
Tram1Q91V04 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tram1Q91V04 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tram1Q91V04 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tram1Q91V04 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tram1Q91V04 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tram1Q91V04 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tram1Q91V04 Gm22567-201ENSMUST00000175542 342 ntBASIC18.74■□□□□ 0.59
Tram1Q91V04 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tram1Q91V04 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Tram1Q91V04 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tram1Q91V04 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tram1Q91V04 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tram1Q91V04 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tram1Q91V04 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.72■□□□□ 0.59
Tram1Q91V04 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tram1Q91V04 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tram1Q91V04 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tram1Q91V04 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
Tram1Q91V04 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tram1Q91V04 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tram1Q91V04 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tram1Q91V04 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Tram1Q91V04 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.7■□□□□ 0.58
Tram1Q91V04 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.7■□□□□ 0.58
Tram1Q91V04 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tram1Q91V04 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tram1Q91V04 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.69■□□□□ 0.58
Tram1Q91V04 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tram1Q91V04 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms