Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup35Q8R4R6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup35Q8R4R6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nup35Q8R4R6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup35Q8R4R6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup35Q8R4R6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nup35Q8R4R6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup35Q8R4R6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup35Q8R4R6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nup35Q8R4R6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup35Q8R4R6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nup35Q8R4R6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup35Q8R4R6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup35Q8R4R6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup35Q8R4R6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nup35Q8R4R6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nup35Q8R4R6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nup35Q8R4R6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.83■□□□□ 0.45
Nup35Q8R4R6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nup35Q8R4R6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup35Q8R4R6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nup35Q8R4R6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Gm22567-201ENSMUST00000175542 342 ntBASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup35Q8R4R6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup35Q8R4R6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup35Q8R4R6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.8■□□□□ 0.44
Nup35Q8R4R6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup35Q8R4R6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.8■□□□□ 0.44
Nup35Q8R4R6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.8■□□□□ 0.44
Nup35Q8R4R6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Nup35Q8R4R6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nup35Q8R4R6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup35Q8R4R6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup35Q8R4R6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup35Q8R4R6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Nup35Q8R4R6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms