Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc58Q8R3Q6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc58Q8R3Q6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc58Q8R3Q6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc58Q8R3Q6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc58Q8R3Q6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc58Q8R3Q6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc58Q8R3Q6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc58Q8R3Q6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc58Q8R3Q6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc58Q8R3Q6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc58Q8R3Q6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc58Q8R3Q6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc58Q8R3Q6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc58Q8R3Q6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc58Q8R3Q6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc58Q8R3Q6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc58Q8R3Q6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc58Q8R3Q6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc58Q8R3Q6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc58Q8R3Q6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc58Q8R3Q6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc58Q8R3Q6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc58Q8R3Q6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc58Q8R3Q6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc58Q8R3Q6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.4■□□□□ 0.7
Ccdc58Q8R3Q6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc58Q8R3Q6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc58Q8R3Q6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc58Q8R3Q6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc58Q8R3Q6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc58Q8R3Q6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc58Q8R3Q6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc58Q8R3Q6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc58Q8R3Q6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms