Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh1Q8CGV4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rdh1Q8CGV4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rdh1Q8CGV4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rdh1Q8CGV4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rdh1Q8CGV4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rdh1Q8CGV4 Gm15546-201ENSMUST00000122095 826 ntBASIC21.43■■□□□ 1.02
Rdh1Q8CGV4 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.43■■□□□ 1.02
Rdh1Q8CGV4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rdh1Q8CGV4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rdh1Q8CGV4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rdh1Q8CGV4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.42■■□□□ 1.02
Rdh1Q8CGV4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh1Q8CGV4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh1Q8CGV4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh1Q8CGV4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh1Q8CGV4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh1Q8CGV4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh1Q8CGV4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.39■■□□□ 1.02
Rdh1Q8CGV4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rdh1Q8CGV4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh1Q8CGV4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh1Q8CGV4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.38■■□□□ 1.01
Rdh1Q8CGV4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh1Q8CGV4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh1Q8CGV4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh1Q8CGV4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh1Q8CGV4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.37■■□□□ 1.01
Rdh1Q8CGV4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Gm15820-201ENSMUST00000201566 728 ntBASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh1Q8CGV4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rdh1Q8CGV4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rdh1Q8CGV4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.34■■□□□ 1.01
Rdh1Q8CGV4 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.34■■□□□ 1.01
Rdh1Q8CGV4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh1Q8CGV4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rdh1Q8CGV4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.33■■□□□ 1
Rdh1Q8CGV4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rdh1Q8CGV4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rdh1Q8CGV4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rdh1Q8CGV4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rdh1Q8CGV4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.31■■□□□ 1
Rdh1Q8CGV4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.3■■□□□ 1
Rdh1Q8CGV4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.3■■□□□ 1
Rdh1Q8CGV4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rdh1Q8CGV4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rdh1Q8CGV4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.29■■□□□ 1
Rdh1Q8CGV4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh1Q8CGV4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rdh1Q8CGV4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rdh1Q8CGV4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh1Q8CGV4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rdh1Q8CGV4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.27■■□□□ 1
Rdh1Q8CGV4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rdh1Q8CGV4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms