Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd9Q8BYH8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd9Q8BYH8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd9Q8BYH8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd9Q8BYH8 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.75■□□□□ 0.43
Chd9Q8BYH8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chd9Q8BYH8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd9Q8BYH8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chd9Q8BYH8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chd9Q8BYH8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd9Q8BYH8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd9Q8BYH8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd9Q8BYH8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.72■□□□□ 0.43
Chd9Q8BYH8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd9Q8BYH8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd9Q8BYH8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Chd9Q8BYH8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.71■□□□□ 0.43
Chd9Q8BYH8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd9Q8BYH8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd9Q8BYH8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Chd9Q8BYH8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd9Q8BYH8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chd9Q8BYH8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd9Q8BYH8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd9Q8BYH8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Gm5874-201ENSMUST00000096101 508 ntBASIC17.68■□□□□ 0.42
Chd9Q8BYH8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd9Q8BYH8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd9Q8BYH8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Gm26571-201ENSMUST00000181399 666 ntBASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd9Q8BYH8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Gm7291-201ENSMUST00000199147 382 ntBASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.65■□□□□ 0.42
Chd9Q8BYH8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.64■□□□□ 0.42
Chd9Q8BYH8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.64■□□□□ 0.42
Chd9Q8BYH8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd9Q8BYH8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd9Q8BYH8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.64■□□□□ 0.41
Chd9Q8BYH8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd9Q8BYH8 Golgb1-201ENSMUST00000023534 498 ntBASIC17.64■□□□□ 0.41
Chd9Q8BYH8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.63■□□□□ 0.41
Chd9Q8BYH8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.63■□□□□ 0.41
Chd9Q8BYH8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.62■□□□□ 0.41
Chd9Q8BYH8 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd9Q8BYH8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd9Q8BYH8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms