Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp1r3eQ8BRJ4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ppp1r3eQ8BRJ4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp1r3eQ8BRJ4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp1r3eQ8BRJ4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ppp1r3eQ8BRJ4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ppp1r3eQ8BRJ4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ppp1r3eQ8BRJ4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ppp1r3eQ8BRJ4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ppp1r3eQ8BRJ4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.58■□□□□ 0.88
Ppp1r3eQ8BRJ4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ppp1r3eQ8BRJ4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ppp1r3eQ8BRJ4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ppp1r3eQ8BRJ4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.56■□□□□ 0.88
Ppp1r3eQ8BRJ4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ppp1r3eQ8BRJ4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ppp1r3eQ8BRJ4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp1r3eQ8BRJ4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.54■□□□□ 0.88
Ppp1r3eQ8BRJ4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp1r3eQ8BRJ4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ppp1r3eQ8BRJ4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp1r3eQ8BRJ4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp1r3eQ8BRJ4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.53■□□□□ 0.88
Ppp1r3eQ8BRJ4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.53■□□□□ 0.88
Ppp1r3eQ8BRJ4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp1r3eQ8BRJ4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.52■□□□□ 0.88
Ppp1r3eQ8BRJ4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ppp1r3eQ8BRJ4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ppp1r3eQ8BRJ4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.51■□□□□ 0.87
Ppp1r3eQ8BRJ4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.5■□□□□ 0.87
Ppp1r3eQ8BRJ4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ppp1r3eQ8BRJ4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.5■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.5■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.5■□□□□ 0.87
Ppp1r3eQ8BRJ4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp1r3eQ8BRJ4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp1r3eQ8BRJ4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp1r3eQ8BRJ4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp1r3eQ8BRJ4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.48■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.48■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp1r3eQ8BRJ4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ppp1r3eQ8BRJ4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp1r3eQ8BRJ4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp1r3eQ8BRJ4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp1r3eQ8BRJ4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Gm7432-201ENSMUST00000210343 879 ntBASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp1r3eQ8BRJ4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp1r3eQ8BRJ4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp1r3eQ8BRJ4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.45■□□□□ 0.86
Ppp1r3eQ8BRJ4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp1r3eQ8BRJ4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ppp1r3eQ8BRJ4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp1r3eQ8BRJ4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp1r3eQ8BRJ4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.43■□□□□ 0.86
Ppp1r3eQ8BRJ4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp1r3eQ8BRJ4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms