Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubp1Q811S7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ubp1Q811S7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.56■■□□□ 1.04
Ubp1Q811S7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubp1Q811S7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubp1Q811S7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubp1Q811S7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ubp1Q811S7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ubp1Q811S7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.54■■□□□ 1.04
Ubp1Q811S7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubp1Q811S7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubp1Q811S7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ubp1Q811S7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubp1Q811S7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubp1Q811S7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubp1Q811S7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.53■■□□□ 1.04
Ubp1Q811S7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.52■■□□□ 1.04
Ubp1Q811S7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.52■■□□□ 1.04
Ubp1Q811S7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.52■■□□□ 1.04
Ubp1Q811S7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubp1Q811S7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ubp1Q811S7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubp1Q811S7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubp1Q811S7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubp1Q811S7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.5■■□□□ 1.03
Ubp1Q811S7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubp1Q811S7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ubp1Q811S7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubp1Q811S7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubp1Q811S7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ubp1Q811S7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.47■■□□□ 1.03
Ubp1Q811S7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubp1Q811S7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubp1Q811S7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubp1Q811S7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ubp1Q811S7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ubp1Q811S7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ubp1Q811S7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubp1Q811S7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubp1Q811S7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubp1Q811S7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ubp1Q811S7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubp1Q811S7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ubp1Q811S7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.44■■□□□ 1.02
Ubp1Q811S7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubp1Q811S7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubp1Q811S7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ubp1Q811S7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubp1Q811S7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ubp1Q811S7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubp1Q811S7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubp1Q811S7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubp1Q811S7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubp1Q811S7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubp1Q811S7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.4■■□□□ 1.02
Ubp1Q811S7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubp1Q811S7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ubp1Q811S7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubp1Q811S7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms