Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Skida1Q80YR3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Skida1Q80YR3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Skida1Q80YR3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Skida1Q80YR3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Skida1Q80YR3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC21.22■□□□□ 0.99
Skida1Q80YR3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Skida1Q80YR3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Skida1Q80YR3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skida1Q80YR3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skida1Q80YR3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Skida1Q80YR3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Skida1Q80YR3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.21■□□□□ 0.99
Skida1Q80YR3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skida1Q80YR3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.21■□□□□ 0.99
Skida1Q80YR3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skida1Q80YR3 Gm38116-201ENSMUST00000193873 1533 ntBASIC21.2■□□□□ 0.98
Skida1Q80YR3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.2■□□□□ 0.98
Skida1Q80YR3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Skida1Q80YR3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.2■□□□□ 0.98
Skida1Q80YR3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.2■□□□□ 0.98
Skida1Q80YR3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Skida1Q80YR3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
Skida1Q80YR3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Skida1Q80YR3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Skida1Q80YR3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Skida1Q80YR3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
Skida1Q80YR3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Skida1Q80YR3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skida1Q80YR3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.18■□□□□ 0.98
Skida1Q80YR3 Gm6546-201ENSMUST00000192096 766 ntBASIC21.18■□□□□ 0.98
Skida1Q80YR3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skida1Q80YR3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.18■□□□□ 0.98
Skida1Q80YR3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.18■□□□□ 0.98
Skida1Q80YR3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skida1Q80YR3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Skida1Q80YR3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.16■□□□□ 0.98
Skida1Q80YR3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Skida1Q80YR3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skida1Q80YR3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skida1Q80YR3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Skida1Q80YR3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skida1Q80YR3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skida1Q80YR3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Skida1Q80YR3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Skida1Q80YR3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Skida1Q80YR3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Skida1Q80YR3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Skida1Q80YR3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Skida1Q80YR3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Thoc7-209ENSMUST00000225325 765 ntBASIC21.12■□□□□ 0.97
Skida1Q80YR3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.12■□□□□ 0.97
Skida1Q80YR3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Skida1Q80YR3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.11■□□□□ 0.97
Skida1Q80YR3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Skida1Q80YR3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Skida1Q80YR3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Skida1Q80YR3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Skida1Q80YR3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms