Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf4Q6PFF0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Scaf4Q6PFF0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scaf4Q6PFF0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf4Q6PFF0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Scaf4Q6PFF0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf4Q6PFF0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf4Q6PFF0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Scaf4Q6PFF0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf4Q6PFF0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Gm22567-201ENSMUST00000175542 342 ntBASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf4Q6PFF0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf4Q6PFF0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf4Q6PFF0 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.61■■□□□ 1.05
Scaf4Q6PFF0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf4Q6PFF0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scaf4Q6PFF0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scaf4Q6PFF0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.58■■□□□ 1.04
Scaf4Q6PFF0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scaf4Q6PFF0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scaf4Q6PFF0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scaf4Q6PFF0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Gm4799-201ENSMUST00000095396 657 ntBASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.56■■□□□ 1.04
Scaf4Q6PFF0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Gm6821-201ENSMUST00000107540 542 ntBASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf4Q6PFF0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scaf4Q6PFF0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf4Q6PFF0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf4Q6PFF0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf4Q6PFF0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.52■■□□□ 1.03
Scaf4Q6PFF0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.51■■□□□ 1.03
Scaf4Q6PFF0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf4Q6PFF0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.51■■□□□ 1.03
Scaf4Q6PFF0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.5■■□□□ 1.03
Scaf4Q6PFF0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Scaf4Q6PFF0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf4Q6PFF0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.5■■□□□ 1.03
Scaf4Q6PFF0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf4Q6PFF0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf4Q6PFF0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf4Q6PFF0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf4Q6PFF0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf4Q6PFF0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms