Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Six1Q62231 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Six1Q62231 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Six1Q62231 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Six1Q62231 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Six1Q62231 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Six1Q62231 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Six1Q62231 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.67■■□□□ 1.22
Six1Q62231 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.67■■□□□ 1.22
Six1Q62231 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.67■■□□□ 1.22
Six1Q62231 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
Six1Q62231 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.66■■□□□ 1.22
Six1Q62231 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Six1Q62231 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Six1Q62231 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Six1Q62231 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Six1Q62231 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Six1Q62231 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Six1Q62231 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Six1Q62231 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Six1Q62231 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Six1Q62231 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Six1Q62231 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Six1Q62231 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Six1Q62231 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Six1Q62231 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Six1Q62231 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.64■■□□□ 1.21
Six1Q62231 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Six1Q62231 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Six1Q62231 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Six1Q62231 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Six1Q62231 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Six1Q62231 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Six1Q62231 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.63■■□□□ 1.21
Six1Q62231 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Six1Q62231 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.63■■□□□ 1.21
Six1Q62231 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Six1Q62231 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Six1Q62231 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.62■■□□□ 1.21
Six1Q62231 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Six1Q62231 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Six1Q62231 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Six1Q62231 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.62■■□□□ 1.21
Six1Q62231 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.62■■□□□ 1.21
Six1Q62231 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Six1Q62231 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Six1Q62231 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Six1Q62231 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Six1Q62231 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.6■■□□□ 1.21
Six1Q62231 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Six1Q62231 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.6■■□□□ 1.21
Six1Q62231 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Six1Q62231 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Six1Q62231 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Six1Q62231 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Six1Q62231 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.59■■□□□ 1.21
Six1Q62231 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Six1Q62231 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Six1Q62231 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.58■■□□□ 1.21
Six1Q62231 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Six1Q62231 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Six1Q62231 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Six1Q62231 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Six1Q62231 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
Six1Q62231 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six1Q62231 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six1Q62231 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.57■■□□□ 1.2
Six1Q62231 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Six1Q62231 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Six1Q62231 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Six1Q62231 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Six1Q62231 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.56■■□□□ 1.2
Six1Q62231 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Six1Q62231 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six1Q62231 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six1Q62231 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Six1Q62231 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six1Q62231 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.54■■□□□ 1.2
Six1Q62231 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Six1Q62231 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Six1Q62231 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Six1Q62231 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six1Q62231 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six1Q62231 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Six1Q62231 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six1Q62231 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six1Q62231 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.52■■□□□ 1.2
Six1Q62231 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six1Q62231 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Six1Q62231 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.52■■□□□ 1.2
Six1Q62231 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six1Q62231 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six1Q62231 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms