Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CishQ62225 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CishQ62225 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CishQ62225 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.94■□□□□ 0.94
CishQ62225 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CishQ62225 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CishQ62225 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CishQ62225 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.93■□□□□ 0.94
CishQ62225 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.93■□□□□ 0.94
CishQ62225 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.93■□□□□ 0.94
CishQ62225 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CishQ62225 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CishQ62225 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CishQ62225 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.92■□□□□ 0.94
CishQ62225 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CishQ62225 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CishQ62225 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CishQ62225 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CishQ62225 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CishQ62225 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CishQ62225 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CishQ62225 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CishQ62225 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CishQ62225 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.9■□□□□ 0.94
CishQ62225 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CishQ62225 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CishQ62225 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
CishQ62225 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CishQ62225 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CishQ62225 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CishQ62225 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.88■□□□□ 0.93
CishQ62225 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CishQ62225 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CishQ62225 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.87■□□□□ 0.93
CishQ62225 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CishQ62225 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CishQ62225 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CishQ62225 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CishQ62225 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CishQ62225 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.86■□□□□ 0.93
CishQ62225 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CishQ62225 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CishQ62225 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CishQ62225 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CishQ62225 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.85■□□□□ 0.93
CishQ62225 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CishQ62225 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CishQ62225 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CishQ62225 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CishQ62225 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CishQ62225 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CishQ62225 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CishQ62225 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CishQ62225 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CishQ62225 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.83■□□□□ 0.93
CishQ62225 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CishQ62225 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CishQ62225 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CishQ62225 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CishQ62225 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CishQ62225 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.82■□□□□ 0.92
CishQ62225 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CishQ62225 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.82■□□□□ 0.92
CishQ62225 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.81■□□□□ 0.92
CishQ62225 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CishQ62225 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CishQ62225 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.81■□□□□ 0.92
CishQ62225 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CishQ62225 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CishQ62225 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CishQ62225 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms