Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Naf1Q3UMQ8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Naf1Q3UMQ8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.34■■□□□ 1.17
Naf1Q3UMQ8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Naf1Q3UMQ8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Naf1Q3UMQ8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.34■■□□□ 1.17
Naf1Q3UMQ8 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.33■■□□□ 1.17
Naf1Q3UMQ8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Naf1Q3UMQ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Naf1Q3UMQ8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Naf1Q3UMQ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Naf1Q3UMQ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Naf1Q3UMQ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Naf1Q3UMQ8 Gm15546-201ENSMUST00000122095 826 ntBASIC22.32■■□□□ 1.16
Naf1Q3UMQ8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.32■■□□□ 1.16
Naf1Q3UMQ8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Naf1Q3UMQ8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Naf1Q3UMQ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Naf1Q3UMQ8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Naf1Q3UMQ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.31■■□□□ 1.16
Naf1Q3UMQ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Naf1Q3UMQ8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Naf1Q3UMQ8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Naf1Q3UMQ8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Naf1Q3UMQ8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Naf1Q3UMQ8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Naf1Q3UMQ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Naf1Q3UMQ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Naf1Q3UMQ8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Naf1Q3UMQ8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Naf1Q3UMQ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Naf1Q3UMQ8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Naf1Q3UMQ8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Naf1Q3UMQ8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Naf1Q3UMQ8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Naf1Q3UMQ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Naf1Q3UMQ8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Naf1Q3UMQ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Naf1Q3UMQ8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Naf1Q3UMQ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Naf1Q3UMQ8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.2■■□□□ 1.14
Naf1Q3UMQ8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Naf1Q3UMQ8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Naf1Q3UMQ8 Gm15820-201ENSMUST00000201566 728 ntBASIC22.19■■□□□ 1.14
Naf1Q3UMQ8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Naf1Q3UMQ8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Naf1Q3UMQ8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms