Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd8Q09XV5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd8Q09XV5 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.58■□□□□ 0.88
Chd8Q09XV5 Gm10849-201ENSMUST00000100397 618 ntBASIC20.57■□□□□ 0.88
Chd8Q09XV5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.57■□□□□ 0.88
Chd8Q09XV5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd8Q09XV5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd8Q09XV5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd8Q09XV5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.56■□□□□ 0.88
Chd8Q09XV5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd8Q09XV5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd8Q09XV5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Chd8Q09XV5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd8Q09XV5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd8Q09XV5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd8Q09XV5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd8Q09XV5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd8Q09XV5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd8Q09XV5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd8Q09XV5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Chd8Q09XV5 Gm40881-201ENSMUST00000223397 166 ntBASIC20.53■□□□□ 0.88
Chd8Q09XV5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd8Q09XV5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd8Q09XV5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd8Q09XV5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd8Q09XV5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.52■□□□□ 0.88
Chd8Q09XV5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd8Q09XV5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd8Q09XV5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd8Q09XV5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd8Q09XV5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd8Q09XV5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd8Q09XV5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd8Q09XV5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd8Q09XV5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd8Q09XV5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd8Q09XV5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd8Q09XV5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd8Q09XV5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd8Q09XV5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd8Q09XV5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd8Q09XV5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd8Q09XV5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.48■□□□□ 0.87
Chd8Q09XV5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd8Q09XV5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd8Q09XV5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd8Q09XV5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd8Q09XV5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd8Q09XV5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd8Q09XV5 Gm26833-201ENSMUST00000180899 440 ntBASIC20.46■□□□□ 0.87
Chd8Q09XV5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd8Q09XV5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd8Q09XV5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.45■□□□□ 0.86
Chd8Q09XV5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd8Q09XV5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd8Q09XV5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd8Q09XV5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd8Q09XV5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd8Q09XV5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd8Q09XV5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.44■□□□□ 0.86
Chd8Q09XV5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd8Q09XV5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd8Q09XV5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.44■□□□□ 0.86
Chd8Q09XV5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.44■□□□□ 0.86
Chd8Q09XV5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.44■□□□□ 0.86
Chd8Q09XV5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.43■□□□□ 0.86
Chd8Q09XV5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd8Q09XV5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
Chd8Q09XV5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd8Q09XV5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.42■□□□□ 0.86
Chd8Q09XV5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.42■□□□□ 0.86
Chd8Q09XV5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd8Q09XV5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd8Q09XV5 Gm37179-201ENSMUST00000194862 823 ntBASIC20.41■□□□□ 0.86
Chd8Q09XV5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms