Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.55■■□□□ 1.04
Limk1P53668 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Limk1P53668 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Limk1P53668 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Limk1P53668 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.54■■□□□ 1.04
Limk1P53668 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Limk1P53668 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Limk1P53668 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Limk1P53668 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Limk1P53668 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.53■■□□□ 1.04
Limk1P53668 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Limk1P53668 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.53■■□□□ 1.04
Limk1P53668 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Limk1P53668 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.52■■□□□ 1.04
Limk1P53668 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Limk1P53668 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Limk1P53668 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Limk1P53668 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.51■■□□□ 1.03
Limk1P53668 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Limk1P53668 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Limk1P53668 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Limk1P53668 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Limk1P53668 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Limk1P53668 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Limk1P53668 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Limk1P53668 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Limk1P53668 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Limk1P53668 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Limk1P53668 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Limk1P53668 Gm21956-201ENSMUST00000179946 522 ntBASIC21.48■■□□□ 1.03
Limk1P53668 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.48■■□□□ 1.03
Limk1P53668 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Limk1P53668 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Limk1P53668 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.47■■□□□ 1.03
Limk1P53668 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Limk1P53668 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Limk1P53668 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Limk1P53668 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Limk1P53668 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.47■■□□□ 1.03
Limk1P53668 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Limk1P53668 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.46■■□□□ 1.03
Limk1P53668 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Limk1P53668 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Limk1P53668 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Limk1P53668 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Limk1P53668 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Limk1P53668 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Limk1P53668 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.45■■□□□ 1.02
Limk1P53668 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.45■■□□□ 1.02
Limk1P53668 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.45■■□□□ 1.02
Limk1P53668 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Limk1P53668 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Limk1P53668 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Limk1P53668 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Limk1P53668 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.43■■□□□ 1.02
Limk1P53668 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Limk1P53668 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Limk1P53668 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Limk1P53668 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Limk1P53668 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.42■■□□□ 1.02
Limk1P53668 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.42■■□□□ 1.02
Limk1P53668 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Limk1P53668 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Limk1P53668 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.41■■□□□ 1.02
Limk1P53668 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Limk1P53668 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.41■■□□□ 1.02
Limk1P53668 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Limk1P53668 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.41■■□□□ 1.02
Limk1P53668 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Limk1P53668 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limk1P53668 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.4■■□□□ 1.02
Limk1P53668 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Limk1P53668 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Limk1P53668 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Limk1P53668 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limk1P53668 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Limk1P53668 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Limk1P53668 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limk1P53668 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Limk1P53668 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limk1P53668 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limk1P53668 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Limk1P53668 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limk1P53668 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms