Protein–RNA interactions for Protein: P34960

Mmp12, Macrophage metalloelastase, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp12P34960 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp12P34960 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp12P34960 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.82■□□□□ 0.92
Mmp12P34960 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp12P34960 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp12P34960 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp12P34960 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp12P34960 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp12P34960 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp12P34960 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp12P34960 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.8■□□□□ 0.92
Mmp12P34960 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp12P34960 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp12P34960 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp12P34960 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp12P34960 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Mmp12P34960 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp12P34960 Gm15039-201ENSMUST00000118914 875 ntBASIC20.79■□□□□ 0.92
Mmp12P34960 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp12P34960 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.79■□□□□ 0.92
Mmp12P34960 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp12P34960 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp12P34960 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp12P34960 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.78■□□□□ 0.92
Mmp12P34960 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp12P34960 Rps24-207ENSMUST00000224568 714 ntBASIC20.78■□□□□ 0.92
Mmp12P34960 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp12P34960 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp12P34960 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Mmp12P34960 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp12P34960 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp12P34960 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp12P34960 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.77■□□□□ 0.91
Mmp12P34960 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mmp12P34960 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.76■□□□□ 0.91
Mmp12P34960 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp12P34960 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mmp12P34960 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Mmp12P34960 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.75■□□□□ 0.91
Mmp12P34960 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.75■□□□□ 0.91
Mmp12P34960 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp12P34960 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp12P34960 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Mmp12P34960 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp12P34960 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.74■□□□□ 0.91
Mmp12P34960 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp12P34960 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp12P34960 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Mmp12P34960 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Mmp12P34960 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Mmp12P34960 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp12P34960 Gm45102-201ENSMUST00000207427 857 ntBASIC20.72■□□□□ 0.91
Mmp12P34960 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp12P34960 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp12P34960 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Mmp12P34960 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp12P34960 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.71■□□□□ 0.91
Mmp12P34960 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Mmp12P34960 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Mmp12P34960 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Mmp12P34960 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Mmp12P34960 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mmp12P34960 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.7■□□□□ 0.9
Mmp12P34960 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Mmp12P34960 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mmp12P34960 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Mmp12P34960 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp12P34960 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp12P34960 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.69■□□□□ 0.9
Mmp12P34960 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Mmp12P34960 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp12P34960 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.69■□□□□ 0.9
Mmp12P34960 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.69■□□□□ 0.9
Mmp12P34960 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms