Protein–RNA interactions for Protein: P28334

Htr1b, 5-hydroxytryptamine receptor 1B, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htr1bP28334 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.26■□□□□ 0.83
Htr1bP28334 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
Htr1bP28334 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htr1bP28334 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htr1bP28334 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htr1bP28334 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htr1bP28334 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htr1bP28334 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.25■□□□□ 0.83
Htr1bP28334 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Gm4799-201ENSMUST00000095396 657 ntBASIC20.25■□□□□ 0.83
Htr1bP28334 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Htr1bP28334 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htr1bP28334 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htr1bP28334 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htr1bP28334 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htr1bP28334 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.24■□□□□ 0.83
Htr1bP28334 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htr1bP28334 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Htr1bP28334 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Htr1bP28334 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Htr1bP28334 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htr1bP28334 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Htr1bP28334 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.22■□□□□ 0.83
Htr1bP28334 Gm9812-201ENSMUST00000061934 968 ntBASIC20.22■□□□□ 0.83
Htr1bP28334 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Htr1bP28334 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Htr1bP28334 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Htr1bP28334 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Htr1bP28334 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Htr1bP28334 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Htr1bP28334 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Htr1bP28334 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htr1bP28334 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Htr1bP28334 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.2■□□□□ 0.82
Htr1bP28334 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htr1bP28334 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htr1bP28334 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htr1bP28334 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htr1bP28334 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htr1bP28334 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htr1bP28334 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Htr1bP28334 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htr1bP28334 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
Htr1bP28334 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
Htr1bP28334 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.18■□□□□ 0.82
Htr1bP28334 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.18■□□□□ 0.82
Htr1bP28334 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.18■□□□□ 0.82
Htr1bP28334 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.18■□□□□ 0.82
Htr1bP28334 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.18■□□□□ 0.82
Htr1bP28334 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Htr1bP28334 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htr1bP28334 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Htr1bP28334 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Htr1bP28334 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htr1bP28334 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htr1bP28334 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Htr1bP28334 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Htr1bP28334 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Htr1bP28334 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.16■□□□□ 0.82
Htr1bP28334 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Htr1bP28334 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Htr1bP28334 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Htr1bP28334 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Htr1bP28334 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Htr1bP28334 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Htr1bP28334 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Htr1bP28334 Gm8503-201ENSMUST00000118131 455 ntBASIC20.15■□□□□ 0.82
Htr1bP28334 Gm22567-201ENSMUST00000175542 342 ntBASIC20.15■□□□□ 0.82
Htr1bP28334 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.15■□□□□ 0.82
Htr1bP28334 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.15■□□□□ 0.82
Htr1bP28334 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Htr1bP28334 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Htr1bP28334 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htr1bP28334 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Htr1bP28334 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.14■□□□□ 0.81
Htr1bP28334 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htr1bP28334 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htr1bP28334 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Htr1bP28334 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Htr1bP28334 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Htr1bP28334 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Htr1bP28334 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Htr1bP28334 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Htr1bP28334 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
Htr1bP28334 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.12■□□□□ 0.81
Htr1bP28334 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.12■□□□□ 0.81
Htr1bP28334 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Htr1bP28334 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms