Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd48P18181 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd48P18181 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cd48P18181 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd48P18181 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cd48P18181 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.57■□□□□ 0.72
Cd48P18181 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd48P18181 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd48P18181 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cd48P18181 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
Cd48P18181 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd48P18181 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.55■□□□□ 0.72
Cd48P18181 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.55■□□□□ 0.72
Cd48P18181 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd48P18181 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd48P18181 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cd48P18181 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.54■□□□□ 0.72
Cd48P18181 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd48P18181 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd48P18181 Gm45364-201ENSMUST00000210883 159 ntBASIC19.54■□□□□ 0.72
Cd48P18181 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cd48P18181 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd48P18181 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.53■□□□□ 0.72
Cd48P18181 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.53■□□□□ 0.72
Cd48P18181 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd48P18181 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd48P18181 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd48P18181 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd48P18181 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.52■□□□□ 0.72
Cd48P18181 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cd48P18181 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd48P18181 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.5■□□□□ 0.71
Cd48P18181 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Cd48P18181 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.5■□□□□ 0.71
Cd48P18181 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd48P18181 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd48P18181 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd48P18181 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd48P18181 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd48P18181 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd48P18181 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.48■□□□□ 0.71
Cd48P18181 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cd48P18181 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cd48P18181 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd48P18181 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd48P18181 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cd48P18181 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd48P18181 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cd48P18181 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.47■□□□□ 0.71
Cd48P18181 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd48P18181 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd48P18181 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Cd48P18181 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd48P18181 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd48P18181 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd48P18181 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.45■□□□□ 0.7
Cd48P18181 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd48P18181 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd48P18181 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cd48P18181 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.44■□□□□ 0.7
Cd48P18181 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd48P18181 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 1344.7 ms