Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msx1P13297 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msx1P13297 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msx1P13297 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Msx1P13297 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Msx1P13297 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.72■□□□□ 0.91
Msx1P13297 Gm45444-201ENSMUST00000211394 898 ntBASIC20.72■□□□□ 0.91
Msx1P13297 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msx1P13297 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Msx1P13297 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Msx1P13297 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msx1P13297 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msx1P13297 Gm14117-201ENSMUST00000122417 843 ntBASIC20.7■□□□□ 0.9
Msx1P13297 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msx1P13297 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.7■□□□□ 0.9
Msx1P13297 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msx1P13297 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Msx1P13297 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Msx1P13297 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.69■□□□□ 0.9
Msx1P13297 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msx1P13297 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msx1P13297 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msx1P13297 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msx1P13297 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msx1P13297 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Msx1P13297 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.67■□□□□ 0.9
Msx1P13297 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msx1P13297 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msx1P13297 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msx1P13297 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.66■□□□□ 0.9
Msx1P13297 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msx1P13297 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msx1P13297 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.66■□□□□ 0.9
Msx1P13297 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.66■□□□□ 0.9
Msx1P13297 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msx1P13297 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msx1P13297 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Msx1P13297 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Msx1P13297 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msx1P13297 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.65■□□□□ 0.9
Msx1P13297 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.65■□□□□ 0.9
Msx1P13297 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msx1P13297 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msx1P13297 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msx1P13297 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msx1P13297 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msx1P13297 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.64■□□□□ 0.89
Msx1P13297 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msx1P13297 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.64■□□□□ 0.89
Msx1P13297 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msx1P13297 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msx1P13297 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msx1P13297 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Msx1P13297 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Msx1P13297 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
Msx1P13297 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msx1P13297 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.62■□□□□ 0.89
Msx1P13297 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msx1P13297 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Msx1P13297 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msx1P13297 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msx1P13297 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.62■□□□□ 0.89
Msx1P13297 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msx1P13297 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msx1P13297 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Msx1P13297 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Msx1P13297 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Msx1P13297 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msx1P13297 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Msx1P13297 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.61■□□□□ 0.89
Msx1P13297 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Msx1P13297 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Msx1P13297 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msx1P13297 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msx1P13297 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Msx1P13297 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.6■□□□□ 0.89
Msx1P13297 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msx1P13297 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msx1P13297 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Msx1P13297 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msx1P13297 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msx1P13297 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msx1P13297 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Msx1P13297 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Msx1P13297 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msx1P13297 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Msx1P13297 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.58■□□□□ 0.89
Msx1P13297 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msx1P13297 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms