Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
NefmP08553 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
NefmP08553 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
NefmP08553 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
NefmP08553 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NefmP08553 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NefmP08553 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
NefmP08553 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
NefmP08553 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
NefmP08553 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
NefmP08553 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC32.45■■■□□ 2.79
NefmP08553 Mir3960-201ENSMUST00000198213 73 ntBASIC32.45■■■□□ 2.79
NefmP08553 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
NefmP08553 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NefmP08553 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NefmP08553 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
NefmP08553 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
NefmP08553 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NefmP08553 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC32.44■■■□□ 2.78
NefmP08553 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NefmP08553 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
NefmP08553 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.43■■■□□ 2.78
NefmP08553 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
NefmP08553 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NefmP08553 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
NefmP08553 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC32.41■■■□□ 2.78
NefmP08553 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NefmP08553 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
NefmP08553 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NefmP08553 Terc-201ENSMUST00000082862 423 ntBASIC32.41■■■□□ 2.78
NefmP08553 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NefmP08553 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NefmP08553 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NefmP08553 Gm6277-202ENSMUST00000224036 2779 ntBASIC32.41■■■□□ 2.78
NefmP08553 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NefmP08553 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NefmP08553 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
NefmP08553 AC154454.1-201ENSMUST00000225253 216 ntBASIC32.4■■■□□ 2.78
NefmP08553 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NefmP08553 AC115037.1-201ENSMUST00000223391 2173 ntBASIC32.39■■■□□ 2.78
NefmP08553 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NefmP08553 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
NefmP08553 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NefmP08553 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NefmP08553 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NefmP08553 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
NefmP08553 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NefmP08553 AC153524.1-201ENSMUST00000220436 1935 ntBASIC32.37■■■□□ 2.77
NefmP08553 Gm32051-202ENSMUST00000197905 2385 ntBASIC32.36■■■□□ 2.77
NefmP08553 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
NefmP08553 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NefmP08553 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NefmP08553 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NefmP08553 Gm45364-201ENSMUST00000210883 159 ntBASIC32.35■■■□□ 2.77
NefmP08553 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
NefmP08553 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
NefmP08553 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
NefmP08553 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
NefmP08553 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.32■■■□□ 2.77
NefmP08553 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
NefmP08553 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
NefmP08553 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
NefmP08553 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
NefmP08553 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.31■■■□□ 2.76
NefmP08553 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NefmP08553 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
NefmP08553 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
NefmP08553 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
NefmP08553 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC32.29■■■□□ 2.76
NefmP08553 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
NefmP08553 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
NefmP08553 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.29■■■□□ 2.76
NefmP08553 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NefmP08553 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
NefmP08553 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NefmP08553 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NefmP08553 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC32.27■■■□□ 2.76
NefmP08553 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
NefmP08553 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
NefmP08553 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
NefmP08553 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
NefmP08553 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
NefmP08553 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.76
NefmP08553 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
NefmP08553 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
NefmP08553 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
NefmP08553 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NefmP08553 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
NefmP08553 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
NefmP08553 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC32.25■■■□□ 2.75
NefmP08553 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NefmP08553 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NefmP08553 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NefmP08553 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
NefmP08553 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NefmP08553 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
NefmP08553 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
NefmP08553 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NefmP08553 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NefmP08553 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms