Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P01852 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01852 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
P01852 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
P01852 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P01852 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P01852 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20■□□□□ 0.79
P01852 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01852 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.99■□□□□ 0.79
P01852 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01852 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
P01852 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P01852 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01852 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01852 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01852 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
P01852 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01852 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01852 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.97■□□□□ 0.79
P01852 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01852 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
P01852 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01852 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01852 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.96■□□□□ 0.79
P01852 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01852 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.95■□□□□ 0.78
P01852 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
P01852 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01852 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.95■□□□□ 0.78
P01852 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
P01852 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P01852 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01852 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.93■□□□□ 0.78
P01852 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P01852 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
P01852 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01852 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01852 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
P01852 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
P01852 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P01852 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P01852 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.92■□□□□ 0.78
P01852 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
P01852 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
P01852 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P01852 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
P01852 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.92■□□□□ 0.78
P01852 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01852 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01852 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01852 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
P01852 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
P01852 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01852 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P01852 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01852 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01852 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.9■□□□□ 0.78
P01852 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
P01852 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
P01852 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.9■□□□□ 0.78
P01852 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
P01852 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01852 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
P01852 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
P01852 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01852 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01852 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01852 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01852 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
P01852 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
P01852 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P01852 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P01852 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
P01852 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P01852 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
P01852 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P01852 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
P01852 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
P01852 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P01852 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P01852 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
P01852 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P01852 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms