Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cpsf2O35218 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Cpsf2O35218 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cpsf2O35218 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
Cpsf2O35218 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.32■■□□□ 1.32
Cpsf2O35218 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.32■■□□□ 1.32
Cpsf2O35218 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.32■■□□□ 1.32
Cpsf2O35218 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.32■■□□□ 1.32
Cpsf2O35218 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpsf2O35218 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpsf2O35218 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpsf2O35218 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf2O35218 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf2O35218 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Cpsf2O35218 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.3■■□□□ 1.32
Cpsf2O35218 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf2O35218 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf2O35218 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Cpsf2O35218 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
Cpsf2O35218 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf2O35218 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.28■■□□□ 1.32
Cpsf2O35218 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.28■■□□□ 1.32
Cpsf2O35218 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf2O35218 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf2O35218 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf2O35218 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf2O35218 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf2O35218 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpsf2O35218 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpsf2O35218 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpsf2O35218 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cpsf2O35218 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cpsf2O35218 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf2O35218 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.26■■□□□ 1.31
Cpsf2O35218 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf2O35218 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf2O35218 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf2O35218 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cpsf2O35218 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cpsf2O35218 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Cpsf2O35218 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf2O35218 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf2O35218 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf2O35218 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf2O35218 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf2O35218 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cpsf2O35218 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cpsf2O35218 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.23■■□□□ 1.31
Cpsf2O35218 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Cpsf2O35218 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.23■■□□□ 1.31
Cpsf2O35218 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpsf2O35218 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.22■■□□□ 1.31
Cpsf2O35218 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cpsf2O35218 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.22■■□□□ 1.31
Cpsf2O35218 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpsf2O35218 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cpsf2O35218 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpsf2O35218 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.21■■□□□ 1.31
Cpsf2O35218 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.21■■□□□ 1.31
Cpsf2O35218 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpsf2O35218 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.2■■□□□ 1.3
Cpsf2O35218 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.2■■□□□ 1.3
Cpsf2O35218 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cpsf2O35218 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpsf2O35218 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Cpsf2O35218 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.19■■□□□ 1.3
Cpsf2O35218 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.19■■□□□ 1.3
Cpsf2O35218 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf2O35218 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cpsf2O35218 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Cpsf2O35218 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cpsf2O35218 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf2O35218 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.17■■□□□ 1.3
Cpsf2O35218 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf2O35218 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cpsf2O35218 Gm6311-201ENSMUST00000073790 878 ntBASIC23.17■■□□□ 1.3
Cpsf2O35218 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cpsf2O35218 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf2O35218 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf2O35218 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf2O35218 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.16■■□□□ 1.3
Cpsf2O35218 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms