Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh1F7BJK1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh1F7BJK1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh1F7BJK1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh1F7BJK1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh1F7BJK1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh1F7BJK1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh1F7BJK1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdh1F7BJK1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh1F7BJK1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh1F7BJK1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh1F7BJK1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.63■□□□□ 0.73
Pcdh1F7BJK1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh1F7BJK1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh1F7BJK1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh1F7BJK1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh1F7BJK1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh1F7BJK1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.58■□□□□ 0.73
Pcdh1F7BJK1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh1F7BJK1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdh1F7BJK1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms