Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f1E9Q9P8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f1E9Q9P8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rdh16f1E9Q9P8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rdh16f1E9Q9P8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rdh16f1E9Q9P8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Rdh16f1E9Q9P8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f1E9Q9P8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f1E9Q9P8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rdh16f1E9Q9P8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f1E9Q9P8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f1E9Q9P8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Rdh16f1E9Q9P8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh16f1E9Q9P8 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.34■□□□□ 0.69
Rdh16f1E9Q9P8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh16f1E9Q9P8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rdh16f1E9Q9P8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rdh16f1E9Q9P8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh16f1E9Q9P8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.33■□□□□ 0.68
Rdh16f1E9Q9P8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Rdh16f1E9Q9P8 Cap2-205ENSMUST00000225824 1634 ntBASIC19.33■□□□□ 0.68
Rdh16f1E9Q9P8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh16f1E9Q9P8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh16f1E9Q9P8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh16f1E9Q9P8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh16f1E9Q9P8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh16f1E9Q9P8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh16f1E9Q9P8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rdh16f1E9Q9P8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rdh16f1E9Q9P8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rdh16f1E9Q9P8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh16f1E9Q9P8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh16f1E9Q9P8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Rdh16f1E9Q9P8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh16f1E9Q9P8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms