Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chd3B1AR17 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd3B1AR17 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.73■■□□□ 1.07
Chd3B1AR17 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd3B1AR17 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd3B1AR17 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd3B1AR17 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Chd3B1AR17 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd3B1AR17 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd3B1AR17 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd3B1AR17 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Chd3B1AR17 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.7■■□□□ 1.06
Chd3B1AR17 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Chd3B1AR17 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.7■■□□□ 1.06
Chd3B1AR17 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd3B1AR17 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd3B1AR17 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd3B1AR17 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd3B1AR17 Gm15546-201ENSMUST00000122095 826 ntBASIC21.7■■□□□ 1.06
Chd3B1AR17 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd3B1AR17 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd3B1AR17 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd3B1AR17 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Chd3B1AR17 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd3B1AR17 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd3B1AR17 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.69■■□□□ 1.06
Chd3B1AR17 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Chd3B1AR17 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.68■■□□□ 1.06
Chd3B1AR17 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.68■■□□□ 1.06
Chd3B1AR17 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Chd3B1AR17 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd3B1AR17 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Chd3B1AR17 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chd3B1AR17 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.67■■□□□ 1.06
Chd3B1AR17 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd3B1AR17 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd3B1AR17 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd3B1AR17 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Chd3B1AR17 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Chd3B1AR17 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd3B1AR17 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd3B1AR17 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Chd3B1AR17 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Chd3B1AR17 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Chd3B1AR17 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Chd3B1AR17 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd3B1AR17 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd3B1AR17 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd3B1AR17 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd3B1AR17 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd3B1AR17 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.63■■□□□ 1.05
Chd3B1AR17 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd3B1AR17 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd3B1AR17 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd3B1AR17 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd3B1AR17 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd3B1AR17 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chd3B1AR17 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd3B1AR17 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd3B1AR17 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd3B1AR17 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd3B1AR17 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd3B1AR17 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.61■■□□□ 1.05
Chd3B1AR17 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Chd3B1AR17 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Chd3B1AR17 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.6■■□□□ 1.05
Chd3B1AR17 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Chd3B1AR17 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd3B1AR17 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.59■■□□□ 1.05
Chd3B1AR17 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
Chd3B1AR17 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Chd3B1AR17 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Chd3B1AR17 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.59■■□□□ 1.05
Chd3B1AR17 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd3B1AR17 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd3B1AR17 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.59■■□□□ 1.05
Chd3B1AR17 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd3B1AR17 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd3B1AR17 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd3B1AR17 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.58■■□□□ 1.05
Chd3B1AR17 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd3B1AR17 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd3B1AR17 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms