Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssc4dA1L0T3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssc4dA1L0T3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssc4dA1L0T3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssc4dA1L0T3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssc4dA1L0T3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssc4dA1L0T3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssc4dA1L0T3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssc4dA1L0T3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ssc4dA1L0T3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssc4dA1L0T3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ssc4dA1L0T3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ssc4dA1L0T3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssc4dA1L0T3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssc4dA1L0T3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ssc4dA1L0T3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssc4dA1L0T3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.37■■□□□ 1.01
Ssc4dA1L0T3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ssc4dA1L0T3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssc4dA1L0T3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssc4dA1L0T3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssc4dA1L0T3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.33■■□□□ 1.01
Ssc4dA1L0T3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ssc4dA1L0T3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssc4dA1L0T3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssc4dA1L0T3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssc4dA1L0T3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssc4dA1L0T3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ssc4dA1L0T3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ssc4dA1L0T3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.32■■□□□ 1
Ssc4dA1L0T3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssc4dA1L0T3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ssc4dA1L0T3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssc4dA1L0T3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.31■■□□□ 1
Ssc4dA1L0T3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssc4dA1L0T3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssc4dA1L0T3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.31■■□□□ 1
Ssc4dA1L0T3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssc4dA1L0T3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssc4dA1L0T3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.3■■□□□ 1
Ssc4dA1L0T3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ssc4dA1L0T3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssc4dA1L0T3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.29■■□□□ 1
Ssc4dA1L0T3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssc4dA1L0T3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssc4dA1L0T3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ssc4dA1L0T3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ssc4dA1L0T3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssc4dA1L0T3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.27■■□□□ 1
Ssc4dA1L0T3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssc4dA1L0T3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms