Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Particl-201ENSMUST00000205370 1560 ntBASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC13.24□□□□□ -0.29
Igkv3-3A0A140T8Q0 Gm37847-201ENSMUST00000192163 1497 ntBASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 Gm31748-201ENSMUST00000194938 1497 ntBASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-3A0A140T8Q0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.22□□□□□ -0.29
Igkv3-3A0A140T8Q0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv3-3A0A140T8Q0 Gm42699-201ENSMUST00000198104 1657 ntBASIC13.21□□□□□ -0.29
Igkv3-3A0A140T8Q0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv3-3A0A140T8Q0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC13.21□□□□□ -0.29
Igkv3-3A0A140T8Q0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Igkv3-3A0A140T8Q0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Igkv3-3A0A140T8Q0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Igkv3-3A0A140T8Q0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Igkv3-3A0A140T8Q0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-3A0A140T8Q0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-3A0A140T8Q0 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.17□□□□□ -0.3
Igkv3-3A0A140T8Q0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-3A0A140T8Q0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Igkv3-3A0A140T8Q0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-3A0A140T8Q0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-3A0A140T8Q0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 Zfp131-205ENSMUST00000223812 663 ntBASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Igkv3-3A0A140T8Q0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-3A0A140T8Q0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-3A0A140T8Q0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-3A0A140T8Q0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Igkv3-3A0A140T8Q0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-3A0A140T8Q0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms