Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-1A0A0G2JEU8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms