Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Gm44428-201ENSMUST00000204474 874 ntBASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.79■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-2A0A0G2JDP3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav9n-2A0A0G2JDP3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms