Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Gm43566-201ENSMUST00000196851 808 ntBASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv5-43A0A0B4J1J2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm5812-201ENSMUST00000061073 957 ntBASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Igkv5-43A0A0B4J1J2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Igkv5-43A0A0B4J1J2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Igkv5-43A0A0B4J1J2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.64■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.63■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.61■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.58■■□□□ 1.21
Igkv5-43A0A0B4J1J2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Gm22567-201ENSMUST00000175542 342 ntBASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms