Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv5A0A0B4J1G9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv5A0A0B4J1G9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv5A0A0B4J1G9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.65■□□□□ 0.42
Trbv5A0A0B4J1G9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv5A0A0B4J1G9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trbv5A0A0B4J1G9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv5A0A0B4J1G9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trbv5A0A0B4J1G9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv5A0A0B4J1G9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv5A0A0B4J1G9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv5A0A0B4J1G9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv5A0A0B4J1G9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv5A0A0B4J1G9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv5A0A0B4J1G9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv5A0A0B4J1G9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trbv5A0A0B4J1G9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv5A0A0B4J1G9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv5A0A0B4J1G9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv5A0A0B4J1G9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Trbv5A0A0B4J1G9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv5A0A0B4J1G9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv5A0A0B4J1G9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv5A0A0B4J1G9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv5A0A0B4J1G9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv5A0A0B4J1G9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv5A0A0B4J1G9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.55■□□□□ 0.4
Trbv5A0A0B4J1G9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv5A0A0B4J1G9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.53■□□□□ 0.4
Trbv5A0A0B4J1G9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv5A0A0B4J1G9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv5A0A0B4J1G9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv5A0A0B4J1G9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
Trbv5A0A0B4J1G9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv5A0A0B4J1G9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv5A0A0B4J1G9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Trbv5A0A0B4J1G9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv5A0A0B4J1G9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms