Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Gm10420-201ENSMUST00000121713 882 ntBASIC16.65■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-52A0A0A6YXC3 Gm22567-201ENSMUST00000175542 342 ntBASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-52A0A0A6YXC3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-52A0A0A6YXC3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-52A0A0A6YXC3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms