Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-9A0A0A6YW37 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.46■□□□□ 0.23
Ighv1-9A0A0A6YW37 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-9A0A0A6YW37 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-9A0A0A6YW37 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-9A0A0A6YW37 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-9A0A0A6YW37 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-9A0A0A6YW37 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-9A0A0A6YW37 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-9A0A0A6YW37 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.38■□□□□ 0.21
Ighv1-9A0A0A6YW37 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-9A0A0A6YW37 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-9A0A0A6YW37 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-9A0A0A6YW37 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Gm6311-201ENSMUST00000073790 878 ntBASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-9A0A0A6YW37 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-9A0A0A6YW37 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-9A0A0A6YW37 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-9A0A0A6YW37 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-9A0A0A6YW37 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-9A0A0A6YW37 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms