Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-7-dv9A0A075B639 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-7-dv9A0A075B639 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-7-dv9A0A075B639 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-7-dv9A0A075B639 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav6-7-dv9A0A075B639 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Scarna2-201ENSMUST00000157560 414 ntBASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trav6-7-dv9A0A075B639 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trav6-7-dv9A0A075B639 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav6-7-dv9A0A075B639 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav6-7-dv9A0A075B639 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-7-dv9A0A075B639 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-7-dv9A0A075B639 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trav6-7-dv9A0A075B639 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6-7-dv9A0A075B639 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-7-dv9A0A075B639 Gm11687-201ENSMUST00000118911 886 ntBASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-7-dv9A0A075B639 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-7-dv9A0A075B639 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Gm16437-201ENSMUST00000025669 507 ntBASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trav6-7-dv9A0A075B639 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trav6-7-dv9A0A075B639 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-7-dv9A0A075B639 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-7-dv9A0A075B639 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-7-dv9A0A075B639 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6-7-dv9A0A075B639 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-7-dv9A0A075B639 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-7-dv9A0A075B639 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-7-dv9A0A075B639 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-7-dv9A0A075B639 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-7-dv9A0A075B639 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-7-dv9A0A075B639 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Trav6-7-dv9A0A075B639 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-7-dv9A0A075B639 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-7-dv9A0A075B639 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.29■□□□□ 0.68
Trav6-7-dv9A0A075B639 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav6-7-dv9A0A075B639 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-7-dv9A0A075B639 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav6-7-dv9A0A075B639 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms