Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Gm27502-201ENSMUST00000183495 199 ntBASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trav10nA0A075B622 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav10nA0A075B622 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav10nA0A075B622 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav10nA0A075B622 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.4■□□□□ 0.7
Trav10nA0A075B622 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav10nA0A075B622 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav10nA0A075B622 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav10nA0A075B622 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10nA0A075B622 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav10nA0A075B622 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav10nA0A075B622 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Trav10nA0A075B622 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10nA0A075B622 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.34■□□□□ 0.69
Trav10nA0A075B622 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav10nA0A075B622 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav10nA0A075B622 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav10nA0A075B622 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav10nA0A075B622 Mir6538-201ENSMUST00000183713 110 ntBASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10nA0A075B622 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10nA0A075B622 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav10nA0A075B622 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10nA0A075B622 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10nA0A075B622 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trav10nA0A075B622 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trav10nA0A075B622 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms