Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-5A0A075B604 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-5A0A075B604 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7n-5A0A075B604 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-5A0A075B604 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7n-5A0A075B604 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Trav7n-5A0A075B604 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7n-5A0A075B604 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Gm22567-201ENSMUST00000175542 342 ntBASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-5A0A075B604 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav7n-5A0A075B604 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-5A0A075B604 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-5A0A075B604 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav7n-5A0A075B604 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav7n-5A0A075B604 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav7n-5A0A075B604 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav7n-5A0A075B604 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav7n-5A0A075B604 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav7n-5A0A075B604 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.89■□□□□ 0.46
Trav7n-5A0A075B604 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-5A0A075B604 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms