Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 BC001981-202ENSMUST00000191393 1545 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc7Q9D541 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Gm17271-201ENSMUST00000165535 355 ntBASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Matn2-206ENSMUST00000228570 2798 ntBASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc7Q9D541 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm15467-201ENSMUST00000120582 445 ntBASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm11745-201ENSMUST00000121669 448 ntBASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc7Q9D541 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms