Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim52Q8CDV4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Mir7085-201ENSMUST00000184353 66 ntBASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gm27772-201ENSMUST00000184900 187 ntBASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gm27892-201ENSMUST00000185017 106 ntBASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim52Q8CDV4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trim52Q8CDV4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Gm6244-201ENSMUST00000178732 841 ntBASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Gm5356-201ENSMUST00000093326 615 ntBASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.49■□□□□ 0.39
Trim52Q8CDV4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim52Q8CDV4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim52Q8CDV4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms