Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm16215-201ENSMUST00000161990 637 ntBASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Gm5866-201ENSMUST00000177881 973 ntBASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf31Q8CCF0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm29667-201ENSMUST00000190817 490 ntBASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm7730-201ENSMUST00000212486 454 ntBASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf31Q8CCF0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf31Q8CCF0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf31Q8CCF0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Gm15957-201ENSMUST00000118893 974 ntBASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Gm15321-201ENSMUST00000121290 288 ntBASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf31Q8CCF0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms