Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Matn2-206ENSMUST00000228570 2798 ntBASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav12-1A0N8R1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms