Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm37230-201ENSMUST00000194491 818 ntBASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm10252-201ENSMUST00000209541 832 ntBASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6d-5A0A075B6B9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav6d-5A0A075B6B9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-5A0A075B6B9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms