Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 AC003669.1-201ENST00000334569 611 ntBASIC17.04■□□□□ 0.32
MKS1Q9NXB0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 HOMER2P1-201ENST00000455653 964 ntBASIC17.04■□□□□ 0.32
MKS1Q9NXB0 STK19B-204ENST00000512515 211 ntBASIC17.04■□□□□ 0.32
MKS1Q9NXB0 AC139887.4-201ENST00000607877 719 ntBASIC17.04■□□□□ 0.32
MKS1Q9NXB0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKS1Q9NXB0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 LINC02199-201ENST00000506655 2702 ntBASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 GUSBP12-201ENST00000513727 720 ntBASIC17.03■□□□□ 0.32
MKS1Q9NXB0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DUX4L17-201ENST00000557360 1267 ntBASIC17.03■□□□□ 0.32
MKS1Q9NXB0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 AL513477.1-201ENST00000602865 2407 ntBASIC17.03■□□□□ 0.32
MKS1Q9NXB0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 AC007950.2-201ENST00000615045 2347 ntBASIC17.03■□□□□ 0.32
MKS1Q9NXB0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MKS1Q9NXB0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 AC087499.1-201ENST00000418141 1075 ntBASIC17.02■□□□□ 0.32
MKS1Q9NXB0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
MKS1Q9NXB0 AL845331.1-201ENST00000424978 1190 ntBASIC17.02■□□□□ 0.32
MKS1Q9NXB0 AC117947.1-201ENST00000427448 529 ntBASIC17.02■□□□□ 0.32
MKS1Q9NXB0 SPDYE13P-201ENST00000445314 798 ntBASIC17.02■□□□□ 0.32
MKS1Q9NXB0 HLA-J-202ENST00000469281 1241 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms