Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Msh4Q99MT2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Msh4Q99MT2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.18
Msh4Q99MT2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msh4Q99MT2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.94□□□□□ -0.18
Msh4Q99MT2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msh4Q99MT2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.93□□□□□ -0.18
Msh4Q99MT2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.93□□□□□ -0.18
Msh4Q99MT2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms