Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AC087163.2-201ENST00000457299 853 ntBASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AC074386.1-202ENST00000463561 864 ntBASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 AC023141.13-201ENST00000604991 943 ntBASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 ACTL9-202ENST00000612068 1252 ntBASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SLC38A9Q8NBW4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 MKNK2P1-201ENST00000437526 628 ntBASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 AL031432.2-201ENST00000566714 459 ntBASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 AL928711.1-201ENST00000570165 459 ntBASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A9Q8NBW4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 ELL2P1-201ENST00000413990 1906 ntBASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 AC007064.4-201ENST00000637740 555 ntBASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SLC38A9Q8NBW4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC38A9Q8NBW4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC38A9Q8NBW4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.21■□□□□ 0.18
SLC38A9Q8NBW4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC38A9Q8NBW4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC38A9Q8NBW4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms