Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP93Q8N1F7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP93Q8N1F7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP93Q8N1F7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP93Q8N1F7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 GNAS-203ENST00000306120 1878 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 AL591424.1-201ENST00000442569 1213 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 IGHV3-65-201ENST00000523210 341 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 TERC-201ENST00000602385 541 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 FAM197Y3-203ENST00000618346 717 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 AL590787.1-201ENST00000568856 1315 ntBASIC18.18■□□□□ 0.5
NUP93Q8N1F7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP93Q8N1F7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 AC106820.2-201ENST00000563775 3264 ntBASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 AP002414.1-201ENST00000391405 1147 ntBASIC18.17■□□□□ 0.5
NUP93Q8N1F7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 AC140113.2-201ENST00000604370 208 ntBASIC18.17■□□□□ 0.5
NUP93Q8N1F7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP93Q8N1F7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 MED15P5-201ENST00000423150 992 ntBASIC18.16■□□□□ 0.5
NUP93Q8N1F7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NUP93Q8N1F7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms