Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gm18195-201ENSMUST00000207604 706 ntBASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm14140-201ENSMUST00000119999 995 ntBASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.59■□□□□ 0.09
Sox30Q8CGW4 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sox30Q8CGW4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.58■□□□□ 0.09
Sox30Q8CGW4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Gm20553-201ENSMUST00000204205 844 ntBASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.58■□□□□ 0.08
Sox30Q8CGW4 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Sox30Q8CGW4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms