Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gm9908-201ENSMUST00000211534 448 ntBASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph6aQ8CDR2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Gm4804-201ENSMUST00000182234 999 ntBASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph6aQ8CDR2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rsph6aQ8CDR2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm18027-201ENSMUST00000218947 619 ntBASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph6aQ8CDR2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm12091-201ENSMUST00000146791 830 ntBASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph6aQ8CDR2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph6aQ8CDR2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms