Protein–RNA interactions for Protein: Q5SV97

PERM1, PGC-1 and ERR-induced regulator in muscle protein 1, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1Q5SV97 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PERM1Q5SV97 AC073592.5-201ENST00000624854 528 ntBASIC17.11■□□□□ 0.33
PERM1Q5SV97 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PERM1Q5SV97 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PERM1Q5SV97 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PERM1Q5SV97 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PERM1Q5SV97 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PERM1Q5SV97 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC073621.1-201ENST00000392730 636 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 GPX1P2-201ENST00000429271 606 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 RNA5SP416-201ENST00000516838 111 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC040169.1-201ENST00000565382 521 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 MIR1199-201ENST00000621445 119 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 FER1L4-210ENST00000615531 5998 ntBASIC17.1■□□□□ 0.33
PERM1Q5SV97 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
PERM1Q5SV97 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PERM1Q5SV97 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 PRYP5-201ENST00000451909 266 ntBASIC17.09■□□□□ 0.33
PERM1Q5SV97 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 AC006557.2-201ENST00000592985 1240 ntBASIC17.09■□□□□ 0.33
PERM1Q5SV97 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SIGLEC16-201ENST00000599858 1437 ntBASIC17.09■□□□□ 0.33
PERM1Q5SV97 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PERM1Q5SV97 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
PERM1Q5SV97 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PERM1Q5SV97 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PERM1Q5SV97 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
PERM1Q5SV97 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms