Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.38□□□□□ -0.11
RxrbP28704 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RxrbP28704 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.37□□□□□ -0.11
RxrbP28704 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.37□□□□□ -0.11
RxrbP28704 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.37□□□□□ -0.11
RxrbP28704 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Gm7153-201ENSMUST00000117092 455 ntBASIC14.37□□□□□ -0.11
RxrbP28704 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.37□□□□□ -0.11
RxrbP28704 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.37□□□□□ -0.11
RxrbP28704 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RxrbP28704 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
RxrbP28704 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RxrbP28704 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RxrbP28704 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RxrbP28704 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.37□□□□□ -0.11
RxrbP28704 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.37□□□□□ -0.11
RxrbP28704 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RxrbP28704 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RxrbP28704 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RxrbP28704 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.36□□□□□ -0.11
RxrbP28704 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.36□□□□□ -0.11
RxrbP28704 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.36□□□□□ -0.11
RxrbP28704 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RxrbP28704 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RxrbP28704 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.36□□□□□ -0.11
RxrbP28704 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RxrbP28704 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RxrbP28704 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.36□□□□□ -0.11
RxrbP28704 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RxrbP28704 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
RxrbP28704 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RxrbP28704 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.35□□□□□ -0.11
RxrbP28704 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.35□□□□□ -0.11
RxrbP28704 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.35□□□□□ -0.11
RxrbP28704 Gm10060-201ENSMUST00000212002 111 ntBASIC14.35□□□□□ -0.11
RxrbP28704 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms